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1

Improving links between literature and biological data with text mining: a case study with GEO, PDB and MEDLINE

Neveol, A., Wilbur, W. J., Lu, Z.

Journal:

Year:

2012

Language:

english

File:

PDF, 278 KB

english, 2012

2

Combining MEDLINE and publisher data to create parallel corpora for the automatic translation of biomedical text

Antonio Jimeno Yepes, Élise Prieur-Gaston, Aurélie Névéol

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 249 KB

english, 2013

3

Clinical Natural Language Processing in languages other than English: opportunities and challenges

Névéol, Aurélie, Dalianis, Hercules, Velupillai, Sumithra, Savova, Guergana, Zweigenbaum, Pierre

Journal:

Journal of Biomedical Semantics

Year:

2018

Language:

english

File:

PDF, 662 KB

english, 2018

4

Natural language processing versus content-based image analysis for medical document retrieval

Aurélie Névéol, Thomas M. Deserno, Stéfan J. Darmoni, Mark Oliver Güld, Alan R. Aronson

Journal:

Journal of the American Society for Information Science and Technology

Year:

2009

Language:

english

File:

PDF, 408 KB

english, 2009

5

Comparing a rule-based versus statistical system for automatic categorization of MEDLINE documents according to biomedical specialty

Susanne M. Humphrey, Aurélie Névéol, Allen Browne, Julien Gobeil, Patrick Ruch, Stéfan J. Darmoni

Journal:

Journal of the American Society for Information Science and Technology

Year:

2009

Language:

english

File:

PDF, 96 KB

english, 2009

6

A context-blocks model for identifying clinical relationships in patient records

Rezarta Islamaj Doğan, Aurélie Névéol, Zhiyong Lu

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 689 KB

english, 2011

7

Enhancing the MeSH thesaurus to retrieve French online health resources in a quality-controlled gateway

Magaly Douyère, Lina F. Soualmia, Aurélie Névéol, Alexandrina Rogozan, Badisse Dahamna, Jean-Philippe Leroy, Benoît Thirion, Stefan J. Darmoni

Journal:

Health Information & Libraries Journal

Year:

2004

Language:

english

File:

PDF, 284 KB

english, 2004

8

Using CISMeF MeSH “Encapsulated” terminology and a categorization algorithm for health resources

Aurélie Névéol, Lina F. Soualmia, Magaly Douyère, Alexandrina Rogozan, Benoı̂t Thirion, Stefan J. Darmoni

Journal:

International Journal of Medical Informatics

Year:

2004

Language:

english

File:

PDF, 106 KB

english, 2004

9

Automatic indexing of online health resources for a French quality controlled gateway

Aurélie Névéol, Alexandrina Rogozan, Stéfan Darmoni

Journal:

Information Processing & Management

Year:

2006

Language:

english

File:

PDF, 238 KB

english, 2006

10

A recent advance in the automatic indexing of the biomedical literature

Aurélie Névéol, Sonya E. Shooshan, Susanne M. Humphrey, James G. Mork, Alan R. Aronson

Journal:

Journal of Biomedical Informatics

Year:

2009

Language:

english

File:

PDF, 492 KB

english, 2009

11

Semi-automatic semantic annotation of PubMed queries: A study on quality, efficiency, satisfaction

Aurélie Névéol, Rezarta Islamaj Doğan, Zhiyong Lu

Journal:

Journal of Biomedical Informatics

Year:

2011

Language:

english

File:

PDF, 863 KB

english, 2011

12

Automatic inference of indexing rules for MEDLINE

Aurélie Névéol, Sonya E Shooshan, Vincent Claveau

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 386 KB

english, 2008

13

A MEDLINE categorization algorithm

Stefan J Darmoni, Aurelie Névéol, Jean-Marie Renard, Jean-Francois Gehanno, Lina F Soualmia, Badisse Dahamna, Benoit Thirion

Journal:

BMC Medical Informatics and Decision Making

Year:

2006

Language:

english

File:

PDF, 826 KB

english, 2006

14

De-identification of clinical notes in French: towards a protocol for reference corpus development

Grouin, Cyril, Névéol, Aurélie

Journal:

Journal of Biomedical Informatics

Year:

2014

Language:

english

File:

PDF, 951 KB

english, 2014

15

Natural language processing of radiology reports for the detection of thromboembolic diseases and clinically relevant incidental findings

Anne-Dominique Pham,Aurélie Névéol,Thomas Lavergne…

Journal:

BMC Bioinformatics

Year:

2014

Language:

english

File:

PDF, 606 KB

english, 2014

16

[IEEE 2010 International Conference on Machine Learning and Applications (ICMLA) - Washington, DC, USA (2010.12.12-2010.12.14)] 2010 Ninth International Conference on Machine Learning and Applications - A Textual Representation Scheme for Identifying Clinical Relationships in Patient Records

Doan, Rezarta Islamaj, Neveol, Aurelie, Lu, Zhiyong

Year:

2010

Language:

english

File:

PDF, 235 KB

english, 2010

17

Extraction of data deposition statements from the literature: a method for automatically tracking research results

Neveol, A., Wilbur, W. J., Lu, Z.

Journal:

Year:

2011

Language:

english

File:

PDF, 299 KB

english, 2011

18

Understanding PubMed(R) user search behavior through log analysis

Islamaj Dogan, R., Murray, G. C., Neveol, A., Lu, Z.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.08 MB

english, 2009

19

Improving information retrieval using Medical Subject Headings Concepts: a test case on rare and chronic diseases

Darmoni, Stéfan J., Soualmia, Lina F., Letord, Catherine, Jaulent, Marie-Christine, Griffon, Nicolas, Thirion, Benoît, Névéol, Aurélie

Journal:

Journal of the Medical Library Association JMLA

Year:

2012

Language:

english

File:

PDF, 8.00 MB

english, 2012

20

Comment on 'MeSH-up: effective MeSH text classification for improved document retrieval'

Neveol, A., Mork, J. G., Aronson, A. R.

Journal:

Year:

2009

Language:

english

File:

PDF, 67 KB

english, 2009

21

[ACM Press the 2nd ACM SIGHIT symposium - Miami, Florida, USA (2012.01.28-2012.01.30)] Proceedings of the 2nd ACM SIGHIT symposium on International health informatics - IHI '12 - Linking multiple disease-related resources through UMLS

Névéol, Aurélie, Li, Jiao, Lu, Zhiyong

Year:

2012

Language:

english

File:

PDF, 555 KB

english, 2012

22

Recommending MeSH terms for annotating biomedical articles

Huang, Minlie, Névéol, Aurélie, Lu, Zhiyong

Journal:

Journal of the American Medical Informatics Association

Year:

2011

Language:

english

File:

PDF, 281 KB

english, 2011

23

Extracting Rx information from clinical narrative

Mork, James G, Bodenreider, Olivier, Demner-Fushman, Dina, Doğan, Rezarta Islamaj, Lang, François-Michel, Lu, Zhiyong, Névéol, Aurélie, Peters, Lee, Shooshan, Sonya E, Aronson, Alan R

Journal:

Journal of the American Medical Informatics Association

Year:

2010

Language:

english

File:

PDF, 232 KB

english, 2010

24

Automatic classification of registered clinical trials towards the Global Burden of Diseases taxonomy of diseases and injuries

Atal, Ignacio, Zeitoun, Jean-David, Névéol, Aurélie, Ravaud, Philippe, Porcher, Raphaël, Trinquart, Ludovic

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 704 KB

english, 2016

25

Contribution of Natural Language Processing in Predicting Rehospitalization Risk

Norman, Christopher, Nguyen, Thu Van, Névéol, Aurélie

Journal:

Year:

2017

Language:

english

File:

PDF, 47 KB

english, 2017

26

Making Sense of Big Textual Data for Health Care: Findings from the Section on Clinical Natural Language Processing

Névéol, A., Zweigenbaum, P.

Journal:

Yearbook of medical informatics

Year:

2017

Language:

english

File:

PDF, 701 KB

english, 2017

27

Design of an extensive information representation scheme for clinical narratives

Deléger, Louise, Campillos, Leonardo, Ligozat, Anne-Laure, Névéol, Aurélie

Journal:

Journal of Biomedical Semantics

Year:

2017

Language:

english

File:

PDF, 2.61 MB

english, 2017

28

Clinical Natural Language Processing in 2014: Foundational Methods Supporting Efficient Healthcare

Névéol, A., Zweigenbaum, P.

Journal:

Yearbook of medical informatics

Year:

2015

Language:

english

File:

PDF, 669 KB

english, 2015

29

Clinical Natural Language Processing in 2015: Leveraging the Variety of Texts of Clinical Interest

Névéol, A., Zweigenbaum, P.

Journal:

Yearbook of medical informatics

Year:

2016

Language:

english

File:

PDF, 624 KB

english, 2016

30

Evaluation of an automatic article selection method for timelier updates of the Comet Core Outcome Set database

Norman, Christopher R, Gargon, Elizabeth, Leeflang, Mariska M G, Névéol, Aurélie, Williamson, Paula R

Journal:

Year:

2019

File:

PDF, 167.11 MB

2019

31

Making Sense of Big Textual Data for Health Care: Findings from the Section on Clinical Natural Language Processing

Névéol, A., Zweigenbaum, P.

Journal:

Yearbook of medical informatics

Year:

2017

Language:

english

File:

PDF, 719 KB

english, 2017

32

Making Sense of Big Textual Data for Health Care: Findings from the Section on Clinical Natural Language Processing

Névéol, A., Zweigenbaum, P.

Journal:

Yearbook of medical informatics

Year:

2017

File:

PDF, 719 KB

2017

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